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Resource ValueSet/FHIR Server from package ch.fhir.ig.ch-elm#current (63 ms)

Package ch.fhir.ig.ch-elm
Type ValueSet
Id Id
FHIR Version R4
Source http://fhir.ch/ig/ch-elm/https://build.fhir.org/ig/ahdis/ch-elm/ValueSet-ch-elm-expecting-organism-specification.html
Url http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification
Version 1.8.0-cibuild
Status active
Date 2024-12-12T16:14:35+00:00
Name ChElmExpectingOrganismSpecification
Title CH ELM Expecting Organism Specification
Experimental False
Realm ch
Authority hl7
Description This CH ELM value set includes the leading codes for the laboratory test results, which have to be completed by another code for the expecting organism.
Copyright CC0-1.0

Resources that use this resource

ConceptMap
ch-elm-expecting-organism-specification-to-results-completion-vs CH ELM Expecting Organism Specification To Results Completion Vs

Resources that this resource uses

CodeSystem
http://loinc.org LOINC Code System
http://loinc.org LOINC codes used in this IG


Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: ValueSet ch-elm-expecting-organism-specification


Source

{
  "resourceType" : "ValueSet",
  "id" : "ch-elm-expecting-organism-specification",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet ch-elm-expecting-organism-specification</b></p><a name=\"ch-elm-expecting-organism-specification\"> </a><a name=\"hcch-elm-expecting-organism-specification\"> </a><a name=\"ch-elm-expecting-organism-specification-en-US\"> </a><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b><a href=\"ValueSet-ch-elm-results-completion-vs.html\">CH ELM Expecting Organism Specification To Results Completion Vs</a></b></td></tr><tr><td><a href=\"https://loinc.org/100911-7/\">100911-7</a></td><td>Campylobacter sp [Presence] in Stool by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/101219-4/\">101219-4</a></td><td>Legionella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/101427-3/\">101427-3</a></td><td>Shigella sp DNA [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/104376-9/\">104376-9</a></td><td>Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/14357-8/\">14357-8</a></td><td>Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-men-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-men-org</a></td></tr><tr><td><a href=\"https://loinc.org/17563-8/\">17563-8</a></td><td>Salmonella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/22826-2/\">22826-2</a></td><td>Influenza virus A identified in Specimen by Bioassay</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/24102-6/\">24102-6</a></td><td>Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/32781-7/\">32781-7</a></td><td>Legionella sp Ag [Presence] in Urine</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/38353-9/\">38353-9</a></td><td>Streptococcus sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-pneu-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org</a></td></tr><tr><td><a href=\"https://loinc.org/39025-2/\">39025-2</a></td><td>Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/41625-5/\">41625-5</a></td><td>Brucella sp DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-bru-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org</a></td></tr><tr><td><a href=\"https://loinc.org/43389-6/\">43389-6</a></td><td>Streptococcus sp identified in Isolate by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-pneu-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org</a></td></tr><tr><td><a href=\"https://loinc.org/46454-5/\">46454-5</a></td><td>Shigella sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/46455-2/\">46455-2</a></td><td>Shigella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/46732-4/\">46732-4</a></td><td>Francisella tularensis subtype [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tul-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tul-org</a></td></tr><tr><td><a href=\"https://loinc.org/47085-6/\">47085-6</a></td><td>Plasmodium sp DNA [Presence] in Blood by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/49612-5/\">49612-5</a></td><td>Salmonella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/49614-1/\">49614-1</a></td><td>Campylobacter sp DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/4992-4/\">4992-4</a></td><td>Campylobacter sp rRNA [Presence] in Specimen by Probe</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/50687-3/\">50687-3</a></td><td>Plasmodium sp Ag [Presence] in Blood</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/50697-2/\">50697-2</a></td><td>Influenza virus A Ag [Identifier] in Isolate</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/51587-4/\">51587-4</a></td><td>Plasmodium sp [Presence] in Blood by Light microscopy</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/552-0/\">552-0</a></td><td>Brucella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-bru-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org</a></td></tr><tr><td><a href=\"https://loinc.org/58473-0/\">58473-0</a></td><td>Haemophilus influenzae serotype DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-haem-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org</a></td></tr><tr><td><a href=\"https://loinc.org/589-2/\">589-2</a></td><td>Legionella sp identified in Bronchial specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/590-0/\">590-0</a></td><td>Legionella sp identified in Sputum by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/593-4/\">593-4</a></td><td>Legionella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/59423-4/\">59423-4</a></td><td>Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/60422-3/\">60422-3</a></td><td>Measles virus genotype [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mea-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mea-org</a></td></tr><tr><td><a href=\"https://loinc.org/65756-9/\">65756-9</a></td><td>Salmonella sp serovar [Type] in Isolate</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org-complete\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org-complete</a></td></tr><tr><td><a href=\"https://loinc.org/6578-9/\">6578-9</a></td><td>Vibrio sp identified in Blood by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6579-7/\">6579-7</a></td><td>Vibrio sp identified in Stool by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6581-3/\">6581-3</a></td><td>Vibrio sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6584-7/\">6584-7</a></td><td>Virus identified in Specimen by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-virus-cult-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-virus-cult-org</a></td></tr><tr><td><a href=\"https://loinc.org/6600-1/\">6600-1</a></td><td>Haemophilus sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-haem-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org</a></td></tr><tr><td><a href=\"https://loinc.org/6604-3/\">6604-3</a></td><td>Influenza virus identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/6609-2/\">6609-2</a></td><td>Listeria sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-lis-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-lis-org</a></td></tr><tr><td><a href=\"https://loinc.org/70569-9/\">70569-9</a></td><td>Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/71429-5/\">71429-5</a></td><td>Campylobacter sp DNA.diarrheagenic [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-diar-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-diar-org</a></td></tr><tr><td><a href=\"https://loinc.org/74037-3/\">74037-3</a></td><td>Transmissible spongiform encephalopathy [Identifier] in Brain by Light microscopy</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-cjd-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cjd-org</a></td></tr><tr><td><a href=\"https://loinc.org/75756-7/\">75756-7</a></td><td>Bacteria identified in Isolate by MS.MALDI-TOF</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-maldi-tof-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-maldi-tof-org</a></td></tr><tr><td><a href=\"https://loinc.org/7899-8/\">7899-8</a></td><td>Hantavirus RNA [Presence] in Serum by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-hanta-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org</a></td></tr><tr><td><a href=\"https://loinc.org/82300-5/\">82300-5</a></td><td>Shigella sp [Presence] in Stool by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/82301-3/\">82301-3</a></td><td>Salmonella sp [Presence] in Stool by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/85827-4/\">85827-4</a></td><td>Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-cpe-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cpe-org</a></td></tr><tr><td><a href=\"https://loinc.org/86520-4/\">86520-4</a></td><td>Hantavirus RNA [Presence] in Blood by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-hanta-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org</a></td></tr><tr><td><a href=\"https://loinc.org/88585-5/\">88585-5</a></td><td>Legionella sp identified in Lower respiratory specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/88588-9/\">88588-9</a></td><td>Legionella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/90066-2/\">90066-2</a></td><td>Corynebacterium sp identified in Isolate by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/92786-3/\">92786-3</a></td><td>Corynebacterium sp DNA [Presence] by NAA with probe detection in Positive blood culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/93385-3/\">93385-3</a></td><td>Salmonella sp DNA [Presence] by NAA with probe detection in Positive blood culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/97313-1/\">97313-1</a></td><td>Salmonella sp DNA [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/97513-6/\">97513-6</a></td><td>Campylobacter sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr></table></li></ul></div>"
  },
  "url" : "http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification",
  "version" : "1.8.0-cibuild",
  "name" : "ChElmExpectingOrganismSpecification",
  "title" : "CH ELM Expecting Organism Specification",
  "status" : "active",
  "experimental" : false,
  "date" : "2024-12-12T16:14:35+00:00",
  "publisher" : "Federal Office of Public Health FOPH",
  "contact" : [
    {
      "name" : "Federal Office of Public Health FOPH",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://www.bag.admin.ch/bag/en/home/das-bag/kontakt-standort.html"
        }
      ]
    }
  ],
  "description" : "This CH ELM value set includes the leading codes for the laboratory test results, which have to be completed by another code for the expecting organism.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "CHE"
        }
      ]
    }
  ],
  "copyright" : "CC0-1.0",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "100911-7",
            "display" : "Campylobacter sp [Presence] in Stool by Organism specific culture"
          },
          {
            "code" : "101219-4",
            "display" : "Legionella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "101427-3",
            "display" : "Shigella sp DNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code" : "104376-9",
            "display" : "Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "14357-8",
            "display" : "Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain"
          },
          {
            "code" : "17563-8",
            "display" : "Salmonella sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "22826-2",
            "display" : "Influenza virus A identified in Specimen by Bioassay"
          },
          {
            "code" : "24102-6",
            "display" : "Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)"
          },
          {
            "code" : "32781-7",
            "display" : "Legionella sp Ag [Presence] in Urine"
          },
          {
            "code" : "38353-9",
            "display" : "Streptococcus sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "39025-2",
            "display" : "Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing"
          },
          {
            "code" : "41625-5",
            "display" : "Brucella sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "43389-6",
            "display" : "Streptococcus sp identified in Isolate by Organism specific culture"
          },
          {
            "code" : "46454-5",
            "display" : "Shigella sp [Presence] in Specimen by Organism specific culture"
          },
          {
            "code" : "46455-2",
            "display" : "Shigella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "46732-4",
            "display" : "Francisella tularensis subtype [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "47085-6",
            "display" : "Plasmodium sp DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "49612-5",
            "display" : "Salmonella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "49614-1",
            "display" : "Campylobacter sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "4992-4",
            "display" : "Campylobacter sp rRNA [Presence] in Specimen by Probe"
          },
          {
            "code" : "50687-3",
            "display" : "Plasmodium sp Ag [Presence] in Blood"
          },
          {
            "code" : "50697-2",
            "display" : "Influenza virus A Ag [Identifier] in Isolate"
          },
          {
            "code" : "51587-4",
            "display" : "Plasmodium sp [Presence] in Blood by Light microscopy"
          },
          {
            "code" : "552-0",
            "display" : "Brucella sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "58473-0",
            "display" : "Haemophilus influenzae serotype DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "589-2",
            "display" : "Legionella sp identified in Bronchial specimen by Organism specific culture"
          },
          {
            "code" : "590-0",
            "display" : "Legionella sp identified in Sputum by Organism specific culture"
          },
          {
            "code" : "593-4",
            "display" : "Legionella sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "59423-4",
            "display" : "Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "60422-3",
            "display" : "Measles virus genotype [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "65756-9",
            "display" : "Salmonella sp serovar [Type] in Isolate"
          },
          {
            "code" : "6578-9",
            "display" : "Vibrio sp identified in Blood by Organism specific culture"
          },
          {
            "code" : "6579-7",
            "display" : "Vibrio sp identified in Stool by Organism specific culture"
          },
          {
            "code" : "6581-3",
            "display" : "Vibrio sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "6584-7",
            "display" : "Virus identified in Specimen by Culture"
          },
          {
            "code" : "6600-1",
            "display" : "Haemophilus sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "6604-3",
            "display" : "Influenza virus identified in Specimen by Organism specific culture"
          },
          {
            "code" : "6609-2",
            "display" : "Listeria sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "70569-9",
            "display" : "Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay"
          },
          {
            "code" : "71429-5",
            "display" : "Campylobacter sp DNA.diarrheagenic [Presence] in Stool by NAA with probe detection"
          },
          {
            "code" : "74037-3",
            "display" : "Transmissible spongiform encephalopathy [Identifier] in Brain by Light microscopy"
          },
          {
            "code" : "75756-7",
            "display" : "Bacteria identified in Isolate by MS.MALDI-TOF"
          },
          {
            "code" : "7899-8",
            "display" : "Hantavirus RNA [Presence] in Serum by NAA with probe detection"
          },
          {
            "code" : "82300-5",
            "display" : "Shigella sp [Presence] in Stool by Culture"
          },
          {
            "code" : "82301-3",
            "display" : "Salmonella sp [Presence] in Stool by Culture"
          },
          {
            "code" : "85827-4",
            "display" : "Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method"
          },
          {
            "code" : "86520-4",
            "display" : "Hantavirus RNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "88585-5",
            "display" : "Legionella sp identified in Lower respiratory specimen by Organism specific culture"
          },
          {
            "code" : "88588-9",
            "display" : "Legionella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "90066-2",
            "display" : "Corynebacterium sp identified in Isolate by Organism specific culture"
          },
          {
            "code" : "92786-3",
            "display" : "Corynebacterium sp DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code" : "93385-3",
            "display" : "Salmonella sp DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code" : "97313-1",
            "display" : "Salmonella sp DNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code" : "97513-6",
            "display" : "Campylobacter sp [Presence] in Specimen by Organism specific culture"
          }
        ]
      }
    ]
  }
}

XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.